Ann Lab Med.  2012 Nov;32(6):413-419.

Clonal Spread of Carbapenem Non-susceptible Acinetobacter baumannii in an Intensive Care Unit in a Teaching Hospital in China

Affiliations
  • 1Department of Laboratory Medicine, Suzhou Municipal Hospital Affiliated Nanjing Medical University, Suzhou, China. zhongqiao83@yahoo.com.cn

Abstract

BACKGROUND
This study was aimed to investigate the genetic diversity and antibiotic resistance profile of the nosocomial infection agent Acinetobacter baumannii from a medical intensive care unit (ICU) in a teaching hospital in Suzhou, China.
METHODS
The genetic relationship among A. baumannii isolates in an ICU was investigated using multilocus sequence typing (MLST). The antibiotic resistance pattern was determined by performing an antibiotic susceptible test, which included an agar dilution method and an E-test method. Resistant determinants, e.g., carbapenemase genes, metallo-beta-lactamases, and class 1 integron, were analyzed by specific PCR and DNA sequencing.
RESULTS
In the present study, 33 non-duplicate isolates were identified as 5 existing sequence types (STs) (ST92, ST75, ST112, ST145, and ST345) and 1 new sequence type STn, which has a G-A mutation at nt268 on ropD40 of ST251. These results reveal limited diversity in carbapenem non-susceptible A. baumannii (CNSAb) isolates in our ICU, which are comprised of only 2 distinct STs, with ST92 and ST75 clustering into a clonal complex (CC) 92. Most CNSAb isolates (94.4%, 17/18) harbored the OXA-23 gene, while no carbapenem-susceptible A. baumannii (CSAb) isolates harbored it. In addition, 66.7% (22/33) isolates were positive for class 1 integrase, and gene cassette analysis showed there are 3 gene arrays among them, i.e., aacA4-catB8-aadA1 (77.3%, 17/22), aacA4 (22.7%, 5/22), and aacC1-orfX-orfX'-aadA1 (4.5%, 1/22).
CONCLUSIONS
When all these data are combined, the antibiotic resistance and wide distribution of CNSAb isolates in our ICU are probably caused by expansion of the CC92 clone.

Keyword

MLST; Molecular epidemiology; Acinetobacter baumannii

MeSH Terms

Acinetobacter baumannii/*drug effects/enzymology/genetics/isolation & purification
Anti-Bacterial Agents/*pharmacology
Bacterial Proteins/genetics
Carbapenems/*pharmacology
China
Drug Resistance, Bacterial/drug effects
Hospitals, Teaching
Humans
Integrases/genetics/metabolism
Intensive Care Units
Microbial Sensitivity Tests
Mutation
Polymerase Chain Reaction
Sequence Analysis, DNA
beta-Lactamases/genetics
Anti-Bacterial Agents
Bacterial Proteins
Carbapenems
Integrases
beta-Lactamases

Figure

  • Fig. 1 Population structure of Acinetobacter baumannii in this study and an existing isolate in China, represented by an eBURST algorithm. A circle represents an ST, and its size corresponds to the number of isolates. The broken line indicates clonal complex (CC) 92. ST112, ST145, ST345, and STn1 are the singletons in this study. ST represents sequence type, i.e. ST92, 1-3-3-2-2-7-3, ST75, 1-3-3-2-2-11-3, ST112, 1-12-56-36-4-61-26, ST145, 21-35-2-28-1-52-4, ST345, 46-12-110-1-16-141-50, and STn1, representing a new sequence type with a G-A mutation at nt268 on the rpoD40 loci of ST251(32-48-54-35-1-11-40); CC represents clonal complex.


Reference

1. Joly-Guillou ML. Clinical impact and pathogenicity of Acinetobacter. Clin Microbiol Infect. 2005. 11:868–873.
Article
2. Abbo A, Navon-Venezia S, Hammer-Muntz O, Krichali T, Siegman-Igra Y, Carmeli Y. Multidrug-resistant Acinetobacter baumannii. Emerg Infect Dis. 2005. 11:22–29.
3. Piazza O, Iasiello A, PapaIanni C, De Robertis E, Servillo G, Rossano F, et al. Incidence of antimicrobial-resistant ventilator associated pneumonia: an eighteen-month survey. Panminerva Med. 2005. 47:265–267.
4. Wu CJ, Lee HC, Lee NY, Shih HI, Ko NY, Wang LR, et al. Predominance of Gram-negative bacilli and increasing antimicrobial resistance in nosocomial bloodstream infections at a university hospital in southern Taiwan, 1996-2003. J Microbiol Immunol Infect. 2006. 39:135–143.
5. Jeon BC, Jeong SH, Bae IK, Kwon SB, Lee K, Young D, et al. Investigation of a nosocomial outbreak of imipenem-resistant Acinetobacter baumannii producing the OXA-23 beta-lactamase in korea. J Clin Microbiol. 2005. 43:2241–2245.
6. Lee K, Yum JH, Yong D, Lee HM, Kim HD, Docquier JD, et al. Novel acquired metallo-beta-lactamase gene, bla(SIM-1), in a class 1 integron from Acinetobacter baumannii clinical isolates from Korea. Antimicrob Agents Chemother. 2005. 49:4485–4491.
7. Poirel L, Marque S, Heritier C, Segonds C, Chabanon G, Nordmann P. OXA-58, a novel class D {beta}-lactamase involved in resistance to carbapenems in Acinetobacter baumannii. Antimicrob Agents Chemother. 2005. 49:202–208.
8. Turton JF, Ward ME, Woodford N, Kaufmann ME, Pike R, Livermore DM, et al. The role of ISAba1 in expression of OXA carbapenemase genes in Acinetobacter baumannii. FEMS Microbiol Lett. 2006. 258:72–77.
Article
9. Brown S, Young HK, Amyes SG. Characterisation of OXA-51, a novel class D carbapenemase found in genetically unrelated clinical strains of Acinetobacter baumannii from Argentina. Clin Microbiol Infect. 2005. 11:15–23.
Article
10. Merkier AK, Centron D. Bla(OXA-51)-type beta-lactamase genes are ubiquitous and vary within a strain in Acinetobacter baumannii. Int J Antimicrob Agents. 2006. 28:110–113.
11. Zhou H, Pi BR, Yang Q, Yu YS, Chen YG, Li LJ, et al. Dissemination of imipenem-resistant Acinetobacter baumannii strains carrying the ISAba1 blaOXA-23 genes in a Chinese hospital. J Med Microbiol. 2007. 56:1076–1080.
12. White PA, McIver CJ, Rawlinson WD. Integrons and gene cassettes in the enterobacteriaceae. Antimicrob Agents Chemother. 2001. 45:2658–2661.
13. Gu B, Tong M, Zhao W, Liu G, Ning M, Pan S. Prevalence and characterization of class I integrons among Pseudomonas aeruginosa and Acinetobacter baumannii isolates from patients in Nanjing, China. J Clin Microbiol. 2007. 45:241–243.
14. Fu Y, Zhou J, Zhou H, Yang Q, Wei Z, Yu Y, et al. Wide dissemination of OXA-23-producing carbapenem-resistant Acinetobacter baumannii clonal complex 22 in multiple cities of China. J Antimicrob Chemother. 2010. 65:644–650.
Article
15. He C, Xie Y, Zhang L, Kang M, Tao C, Chen Z, et al. Increasing imipenem resistance and dissemination of the ISAba1-associated blaOXA-23 gene among Acinetobacter baumannii isolates in an intensive care unit. J Med Microbiol. 2011. 60:337–341.
16. Adams-Haduch JM, Onuoha EO, Bogdanovich T, Tian GB, Marschall J, Urban CM, et al. Molecular epidemiology of carbapenem-nonsusceptible Acinetobacter baumannii in the United States. J Clin Microbiol. 2011. 49:3849–3854.
Article
17. Chang HC, Wei YF, Dijkshoorn L, Vaneechoutte M, Tang CT, Chang TC. Species-level identification of isolates of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex by sequence analysis of the 16S-23S rRNA gene spacer region. J Clin Microbiol. 2005. 43:1632–1639.
18. Clinical and Laboratory Standards Institute. Performance standards for antimicrobial disk and dilution susceptibility tests for bacteria isolated from animals, 3rd ed., approved standard M31-A3. 2008. Wayne, PA: CLSI, Clinical and Laboratory Standards Institute.
19. Lee K, Lim YS, Yong D, Yum JH, Chong Y. Evaluation of the Hodge test and the imipenem-EDTA double-disk synergy test for differentiating metallo-beta-lactamase-producing isolates of Pseudomonas spp. and Acinetobacter spp. J Clin Microbiol. 2003. 41:4623–4629.
20. Bartual SG, Seifert H, Hippler C, Luzon MA, Wisplinghoff H, Rodriguez-Valera F. Development of a multilocus sequence typing scheme for characterization of clinical isolates of Acinetobacter baumannii. J Clin Microbiol. 2005. 43:4382–4390.
21. Feil EJ, Li BC, Aanensen DM, Hanage WP, Spratt BG. eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data. J Bacteriol. 2004. 186:1518–1530.
Article
22. Wang F, Zhu D, Hu F, Ruan F, Ni Y, Sun J, et al. CHINET 2007 Surveillance of bacterial resistance in China (Chinese). Zhongguo Gan Ran Yu Hua Liao Za Zhi. 2008. 8:325–334.
23. Zhang L, Yang W, Xiao M, Xu Y, Zheng B, Lü Y. Mohnarin annual report 2010:surveillance of antimicrobial resistance in bacteria isolated from intensive care units (Chinese). Zhonghua Yi Yuan Gan Ran Xue Za Zhi. 2012. 28:330–335.
24. Zhang JP, Zhu W, Chu YZ, Tian SF, Chen BY. Molecular epidemiological study of multi-drug resistant Acinetobacter baumannii (Chinese). Zhonghua Nei Ke Za Zhi. 2010. 49:657–661.
25. Grosso F, Carvalho KR, Quinteira S, Ramos A, Carvalho-Assef AP, Asensi MD, et al. OXA-23-producing Acinetobacter baumannii: a new hotspot of diversity in Rio de Janeiro? J Antimicrob Chemother. 2011. 66:62–65.
Article
26. Wang H, Guo P, Sun H, Yang Q, Chen M, Xu Y, et al. Molecular epidemiology of clinical isolates of carbapenem-resistant Acinetobacter spp. from Chinese hospitals. Antimicrob Agents Chemother. 2007. 51:4022–4028.
27. Lei J, Yuan L, Li H, Zeng X. Study of metallo-β-lactamase of Carbapenems-resistant Acinetobacter baumanii (Chinese). Xian Dai Zhong Xi Yi Jie He Za Zhi. 2009. 27:3280–3281.
28. Dawes FE, Kuzevski A, Bettelheim KA, Hornitzky MA, Djordjevic SP, Walker MJ. Distribution of class 1 integrons with IS26-mediated deletions in their 3'-conserved segments in Escherichia coli of human and animal origin. PLoS One. 2010. 5:e12754.
Article
29. Moura A, Soares M, Pereira C, Leitao N, Henriques I, Correia A. INTEGRALL: a database and search engine for integrons, integrases and gene cassettes. Bioinformatics. 2009. 25:1096–1098.
Article
30. Xu X, Kong F, Cheng X, Yan B, Du X, Gai J, et al. Integron gene cassettes in Acinetobacter spp. strains from South China. Int J Antimicrob Agents. 2008. 32:441–445.
Article
31. Hornsey M, Loman N, Wareham DW, Ellington MJ, Pallen MJ, Turton JF, et al. Whole-genome comparison of two Acinetobacter baumannii isolates from a single patient, where resistance developed during tigecycline therapy. J Antimicrob Chemother. 2011. 66:1499–1503.
Article
32. Fournier PE, Vallenet D, Barbe V, Audic S, Ogata H, Poirel L, et al. Comparative genomics of multidrug resistance in Acinetobacter baumannii. PLoS Genet. 2006. 2:e7.
Article
33. Zhou H, Zhang T, Yu D, Pi B, Yang Q, Zhou J, et al. Genomic analysis of the multidrug-resistant Acinetobacter baumannii strain MDR-ZJ06 widely spread in China. Antimicrob Agents Chemother. 2011. 55:4506–4512.
Article
34. Krizova L, Dijkshoorn L, Nemec A. Diversity and evolution of AbaR genomic resistance islands in Acinetobacter baumannii strains of European clone I. Antimicrob Agents Chemother. 2011. 55:3201–3206.
Article
35. Ruiz-Martinez L, Lopez-Jimenez L, Fuste E, Vinuesa T, Martinez JP, Vinas M. Class 1 integrons in environmental and clinical isolates of Pseudomonas aeruginosa. Int J Antimicrob Agents. 2011. 38:398–402.
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