- Ten Cases of Taenia saginata Infection Confirmed by Analysis of the Internal Transcribed Spacer 1 rDNA Region in the Republic of Korea
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Song SM, Yun HS, VanBik D, Chang HH, Lee SA, Kim SW, Ryoo N, Eun DY, Lee NY, Goo YK, Hong Y, Ock M, Cha HJ, Chung DI
- KMID: 2459480
- Korean J Parasitol.
- 2019 Aug;57(4):417-422.
- doi: 10.3347/kjp.2019.57.4.417
From October 2015 to August 2018, tapeworm proglottids were obtained from 10 patients who were residents of Daegu and Gyeongbuk provinces and had a history of raw beef consumption. Most... -
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- Comparison of the Utility of dnaJ and 16S rDNA Sequences for Identification of Clinical Isolates of Vibrio Species
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Choi IS, Moon DS, Park G, Kang SH, Kim CM, Ahn YJ, Kim DM, Yun NR, Lim DH, Shin SH, Kook JK, Chang YH, Jang SJ
- KMID: 2398413
- Lab Med Online.
- 2018 Jan;8(1):7-14.
- doi: 10.3343/lmo.2018.8.1.7
BACKGROUND: Among the many Vibrio species that can cause infections in humans, several species can cause a fatal outcome. Therefore, accurate identification of Vibrio species is very important. Since some... -
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- Utility of a Direct 16S rDNA PCR and Sequencing for Etiological Diagnosis of Infective Endocarditis
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Kim MS, Chang J, Kim MN, Choi SH, Jung SH, Lee JW, Sung H
- KMID: 2425991
- Ann Lab Med.
- 2017 Nov;37(6):505-510.
- doi: 10.3343/alm.2017.37.6.505
BACKGROUND: Cases of infective endocarditis (IE) require prompt etiological diagnosis for effective treatment. Molecular methods can aid in rapid and reliable diagnosis of culture-negative IE cases. We evaluated the utility... -
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- Identification of Leptospira species of Korean Isolates using Phylogenetic Analysis of Polymerase Chain Reaction-amplified 16S rDNA and LipL32 Genes
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Park KH, Choi YJ, Shin SH, Choi MK, Kim YW, Jang WJ
- KMID: 2135358
- J Bacteriol Virol.
- 2014 Mar;44(1):59-66.
- doi: 10.4167/jbv.2014.44.1.59
In this study, we selected only serologically identified 15 Leptosira interrogans isolates in the past and analyzed and identified them by using molecular method. The partial 16S rDNA and LipL32... -
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- Molecular Taxonomy of Ganoderma cupreum from Southern India Inferred from ITS rDNA Sequences Analysis
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Kaliyaperumal M
- KMID: 2312711
- Mycobiology.
- 2013 Dec;41(4):248-251.
Ganoderma is a cosmopolitan wood-rot basidiomycete that has been extensively studied for its pathogencity and medicinal properties. Identification of Ganoderma based on macro-microscopic features led to large number of synonyms... -
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- The Application of 26S rDNA PCR-RFLP in the Identification and Classification of Malassezia Yeast
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Lee YW, Lim SH, Ahn KJ
- KMID: 1513601
- Korean J Med Mycol.
- 2006 Sep;11(3):141-153.
BACKGROUND: Malassezia yeast are lipophilic fungi that are found in 75~80% of healthy adults. The yeast are known to be associated with pityriasis versicolor, seborrheic dermatitis, Malassezia folliculitis, and recently... -
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- Identification of bacteria from the peri-implant sulcus of orthodontic mini-implants using 16S rDNA clone library
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Lim SH, Kim KW, Yoo SY, Kook JK, Chang YI
- KMID: 2273584
- Korean J Orthod.
- 2006 Aug;36(4):251-262.
OBJECTIVE: The purpose of this study was to compare the bacterial flora at the peri-implant sulcus of the orthodontic mini-implant placed in the alveolar mucosa with the bacterial flora at... -
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- Evaluation of a 16S rDNA PCR Assay for Detection of Bacterial Pathogens in Blood Culture Broth
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Jang SJ, Kim JH, Kim YS, Shin JH, Park G, Chaulagain BP, Moon DS, Park YJ
- KMID: 2146993
- Korean J Clin Microbiol.
- 2006 Apr;9(1):64-70.
BACKGROUND: Rapid detection of pathogens in blood is important in patient management, because the mortality rate associated with bloodstream infections is very high. We evaluated the efficiency of a 16S... -
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- Sequence Analysis of the Internal Transcribed Spacer of Ribosomal DNA in the Genus Rhizopus
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Park YJ, Min BR
- KMID: 2312459
- Mycobiology.
- 2005 Jun;33(2):109-112.
The internal transcribed spacer (ITS) regions including the 3'-end of 18S rRNA gene, 5.8S rRNA gene and the 5'-end of the 28S rRNA gene of Rhizopus spp. were amplified by... -
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- Strain Differentiation of Trichophyton rubrum Using Polymorphism of rDNA Intergenic Spacer
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Choi JS, Shin DH, Seung JJ, Kim KH
- KMID: 2141962
- Korean J Med Mycol.
- 2004 Dec;9(4):206-213.
BACKGROUND: In Korea, Trichophyton (T.) rubrum is occupied more than 80% of causative fungi of dermatophytosis. Strain differentiation of T. rubrum is essential for epidermiologic study. OBJECTIVE: The aim of... -
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- A Comparison of ID 32 GN System with Amplified Ribosomal DNA Restriction Analysis for Identification of Acinetobacter baumannii
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Shin MG, Kim SH, Lee JC, Cho D, Kee SJ, Shin JH, Suh SP, Ryang DW
- KMID: 1730182
- Korean J Lab Med.
- 2004 Apr;24(2):107-112.
BACKGROUND: The glucose -acidifying genomic species 1, 2, 3 and 13 of the genus Acinetobacter are highly related genetically and may be difficult to differentiate by phenotypic identification schemes using... -
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- Ribosomal DNA Gene Analysis of Dematiaceous Fungi Using Polymerase Chain Reaction-Restriction Fragment Length Polymorphism
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Suh MK, Kim YJ, Kwon SW, Kim JC
- KMID: 2086742
- Korean J Dermatol.
- 2003 Nov;41(11):1478-1486.
BACKGROUND: There are three kinds of diseases caused by dematiaceous fungi: chromoblastomycosis, phaeohyphomycosis, and eumycotic mycetoma. The dematiaceous fungi have been identified and classified by morphological, biochemical and physiological tests.... -
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- Prokaryotic 16S rDNAs from Various Prokaryotes That Are Suggested as Etiologies of Idiopathic Chronic Prostatitis
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Youn WY, Lee GH
- KMID: 2293557
- Korean J Urol.
- 2003 Sep;44(9):929-933.
PURPOSE: Specific microorganisms, such as C trachomatis, Mycoplasma and T vaginalis, are rarely detected in idiopathic chronic prostatitis. However, fastidious and nonculturable microorganisms may be important in the etiology of... -
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- Restriction Analyses of PCR Amplified Partial SSU Ribosomal DNA to Distinguish Arbuscular Mycorrhizal Fungi from Other Fungi Colonizing Plant Roots
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Lee JK, Tae MS, Eom AH, Lee SS
- KMID: 2312402
- Mycobiology.
- 2003 Jun;31(2):68-73.
Roots of Glycine max and Miscanthus sinensis and soil samples were collected from various field sites at Goesan, Chungbuk in Korea. Microscopic observations of the roots indicated high colonization rates... -
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- Identification of putative pathogens in acute endodontic infections by PCR based on 16S rDNA
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Kim JH, Yoo SY, Lim SA, Kook JK, Lim SS, Park SH, Hwang HK
- KMID: 1987246
- J Korean Acad Conserv Dent.
- 2003 Mar;28(2):178-183.
- doi: 10.5395/JKACD.2003.28.2.178
The purpose of this study was to investigate the frequency of 7 putative pathogens in endodontic infections. The specimens were collected from infected pulpal tissue of patients who were referred... -
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- The Determination of the Partial 28S Ribosomal DNA Sequences and Rapid Detection of Phellinus linteus and Related species
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Park HS, Kim GY, Nam BH, Lee SJ, Lee JD
- KMID: 2312374
- Mycobiology.
- 2002 Jun;30(2):82-87.
Species of Phellinus were known to harmful fungi causing white pocket rot and severe plant disease such as canker or heart-rot in living trees in the West, but some species... -
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- Strain Differentiation of Trichophyton rubrum Isolated from 2 Sites of the Same Patients by Analysis of Ribosomal DNA Nontranscribed Spacer
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Kim HC, Shin DH, Choi JS, Kim KH
- KMID: 2141968
- Korean J Med Mycol.
- 2002 Jun;7(2):69-77.
BACKGROUND: In Korea, Trichophyton (T.) rubrum is the most common dermatophyte and occupied more than 80% of all isolates. Although strains differentiation is essential for epidemiologic studies, differentiation of T.... -
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- Sequence Analyses of PCR Amplified Partial SSU of Ribosomal DNA for Identifying Arbuscular Mycorrhizal Fungi in Plant Roots
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Tae MS, Eom AH, Lee SS
- KMID: 2312358
- Mycobiology.
- 2002 Mar;30(1):13-17.
The genomic DNAs were extracted from roots of Glycine max and Sorghum bicolor, and compared with those from spores of two arbuscular mycorrhizal (AM) fungi, Glomus mosseae and Scutellospora heterogama.... -
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- Identification of Fastidious Mycobacteria other than M. tuberculosis ( MOTT ) by Comparative Sequence Analysis of rpoB and 16S rDNA
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Kim BJ, Im SI, Kim YW, Bai GH, Kim SJ, Lee KH, Cha CY, Kook YH
- KMID: 1572904
- J Bacteriol Virol.
- 2002 Mar;32(1):39-45.
Conventional tests for the identification of mycobacteria may frequently result in erroneous identification and underestimate the diversity within the genus Mycobacterium. However, this problem can be overcome by molecular approach... -
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- Phylogenetic Analysis of Caterpillar Fungi by Comparing ITS 1-5.8S-ITS 2 Ribosomal DNA Sequences
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Park JE, Kim GY, Park HS, Nam BH, An WG, Cha JH, Lee TH, Lee JD
- KMID: 2312345
- Mycobiology.
- 2001 Sep;29(3):121-131.
This study was carried out to identify the phylogenetic relationships among several caterpillar fungi by comparing the sequences of internal transcribed spacer regions (ITS1 and ITS2) and 5.8S ribosomal DNA... -
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