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Classification of Human Papillomavirus (HPV) Risk Type via Text Mining

Park SB, Hwang S, Zhang BT

  • KMID: 2053070
  • Genomics Inform.
  • 2003 Dec;1(2):80-86.
Human Papillomavirus (HPV) infection is known as the main factor for cervical cancer which is a leading cause of cancer deaths in women worldwide. Because there are more than 100...
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PubMiner: Machine Learning-based Text Mining for Biomedical Information Analysis

Eom JH, Zhang BT

  • KMID: 2166172
  • Genomics Inform.
  • 2004 Jun;2(2):99-106.
In this paper we introduce PubMiner, an intelligent machine learning based text mining system for mining biological information from the literature. PubMiner employs natural language processing techniques and machine learning...
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Gene Expression Pattern Analysis via Latent Variable Models Coupled with Topographic Clustering

Chang JH, Chi SW, Zhang BT

  • KMID: 1973993
  • Genomics Inform.
  • 2003 Sep;1(1):32-39.
We present a latent variable model-based approach to the analysis of gene expression patterns, coupled with topographic clustering. Aspect model, a latent variable model for dyadic data, is applied to...
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Identification of Caenorhabditis elegans MicroRNA Targets Using a Kernel Method

Lee WJ, Nam JW, Kim SK, Zhang BT

  • KMID: 1572614
  • Genomics Inform.
  • 2005 Mar;3(1):15-23.
BACKGROUND: MicroRNAs (miRNAs)are a class of noncoding RNAs found in various organisms such as plants and mammals. However, most of the mRNAs regulated by miRNAs are unknown. Furthermore, miRNA targets...
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