Ann Lab Med.  2015 Mar;35(2):242-245. 10.3343/alm.2015.35.2.242.

Molecular Characteristics of Noroviruses Genogroup I and Genogroup II Detected in Patients With Acute Gastroenteritis

Affiliations
  • 1Department Microbiology, Seoul Metropolitan Government Research Institute of Public Health and Environment, Gwacheon, Korea. hhj3814@seoul.go.kr

Abstract

Noroviruses are the leading cause of epidemic gastroenteritis, including foodborne outbreak, in Korea. The prevalence of human noroviruses was studied in diarrheal stool samples of patients with acute gastroenteritis by conventional duplex reverse transcription (RT)-PCR. Diarrheal stool samples were collected from 1,685 patients from the local hospitals in Seoul. The prevalence of the noroviruses was 22.8% (222/972 patients) in 2012 and 11.2% (80/713 patients) in 2013, with a total of 17.9% (302/1,685 patients). Genotyping was performed on 302 norovirus-positive stool samples to reveal 5.6% prevalence of genogroup I (GI) (17/302) and 94.4% prevalence of genogroup II (GII) (285/302). The patients with norovirus-associated acute gastroenteritis mostly showed prevalence of GII norovirus, especially GII.4 (64.6%; 195/302).

Keyword

Norovirus; Acute gastroenteritis; Prevalence; GI; GII; GII.4

MeSH Terms

Acute Disease
Feces/virology
Gastroenteritis/*diagnosis/epidemiology/virology
Genotype
Humans
Norovirus/*genetics/isolation & purification
Prevalence
RNA, Viral/genetics/metabolism
Real-Time Polymerase Chain Reaction
RNA, Viral

Cited by  1 articles

Human Norovirus Genogroups Detected from Acute Gastroenteritis Patients in Seoul from May 2013 to April 2015
Heejin Ham, Seah Oh, Hyunjung Seung, Jungim Jang, Changho Han
J Bacteriol Virol. 2015;45(4):376-381.    doi: 10.4167/jbv.2015.45.4.376.


Reference

1. Lee JI. Molecular characterization of enteric viruses isolated from acute gastroenteritis patients. Chung Buk University;2008. Ph.D. Thesis.
2. Park SH, Kim EJ, Oh SA, Kim CK, Choi SS, Cho SJ, et al. Viral agents associated with acute gastroenteritis in Seoul, Korea. Clin Lab. 2011; 57:59–65. PMID: 21391466.
3. Lee JI, Park SH, Kim MS, Oh YH, Yu IS, Choi BH, et al. Surveillance of acute gastroenteritis in Seoul, Korea, during May 2004 and June 2007. J Bacteriol Virol. 2009; 39:363–371.
Article
4. Ham HJ, Oh SA, Kim CK, Jang JI, Cho SJ, Choi SM. Molecular characteristics of human noroviruses genogroup I and genogroup II detected in acute gastroenteritis patients in Seoul. J Environ Health Sci. 2012; 38:57–65.
Article
5. Oh SA, Park SH, Ham HJ, Seung HJ, Jang JI, Suh SW, et al. Molecular characterization of norovirus and rotavirus in outbreak of acute gastroenteritis in Seoul. J Bacteriol Virol. 2013; 43:307–316.
Article
6. Park DJ, Kim JS, Park JY, Kim HS, Song WK, Kim HS, et al. Epidemiological analysis of norovirus infection between March 2007 and February 2010. Korean J Lab Med. 2010; 30:647–653. PMID: 21157152.
Article
8. Gong YW, Oh BY, Kim HY, Lee MY, Kim YH, Go JM, et al. Molecular epidemiologic investigation of norovirus infections in Incheon city, Korea, from 2005 to 2007. J Bacteriol Virol. 2008; 38:249–257.
Article
9. Korea Centers for Disease Control and Prevention (KCDC). EnterNet Korea. Laboratory surveillance of viral acute gastroenteritis in Korea;2012. Updated on Nov 2013. http://www.cdc.go.kr/CDC/notice/CdcKrInfo0301.jsp?menuIds=HOME001-MNU0004-MNU0036-MNU0037&cid=21904. Yearly Report 2013;41-52.
10. Kim HS, Hyun JW, Kim HS, Kim JS, Song WK, Lee KM. Emergence of GII.4 Sydney norovirus in South Korea during the winter of 2012-2013. J Microbiol Biotechnol. 2013; 23:1641–1643. PMID: 24043126.
Article
11. Yu Y, Yan S, Li B, Pan Y, Wang Y. Genetic diversity distribution of human norovirus in China (1999-2011). Biomed Res Int. 2014; 2014:196169. PMID: 24672783.
12. Bok K, Abente EJ, Realpe-Quintero M, Mitra T, Sosnovtsev SV, Kapikian AZ, et al. Evolutionary dynamics of GII.4 noroviruses over a 34-year period. J Virol. 2009; 83:11890–11901. PMID: 19759138.
Article
Full Text Links
  • ALM
Actions
Cited
CITED
export Copy
Close
Share
  • Twitter
  • Facebook
Similar articles
Copyright © 2024 by Korean Association of Medical Journal Editors. All rights reserved.     E-mail: koreamed@kamje.or.kr