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Phylogeny, host-parasite relationship and zoogeography

Hasegawa H

Phylogeny is the evolutionary history of a group or the lineage of organisms and is reconstructed based on morphological, molecular and other characteristics. The genealogical relationship of a group...
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Haplotype Phylogeny of a 200kb Region in the Human Chromosome X Terminal Band (q28)

Kim S

  • KMID: 2166409
  • Genomics Inform.
  • 2008 Sep;6(3):130-135.
The haplotypes of a 200 kb region in the human chromosome X terminal band (q28) were analyzed using the International HapMap Project PhaseII data, which had been collected for three...
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Taxonomic Study of Amanita Subgenus Lepidella and Three Unrecorded Amanita Species in Korea

Kim CS, Jo JW, Kwag YN, Kim JH, Shrestha B, Sung GH, Han SK

  • KMID: 2312701
  • Mycobiology.
  • 2013 Dec;41(4):183-190.
Amanita Pers. is a well-known monophyletic mushroom genus with a broad distribution. However, the diversity of Korean Amanita species has been underestimated, and most taxonomic studies conducted in Korea have...
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Candelaria asiatica, an Ignored New Species from South Korea

Liu D, Hur JS

The genus Candelaria is characterized by a micro-foliose to micro-fruticose thallus and contains eight species, two of which were reported in South Korea. During the excursion of a Korean lichen...
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Recent advances in Bayesian inference of isolation-with-migration models

Chung Y

Isolation-with-migration (IM) models have become popular for explaining population divergence in the presence of migrations. Bayesian methods are commonly used to estimate IM models, but they are limited to small...
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Molecular Epidemiology of Human Immunodeficiency Virus

Chin BS

During the evolution of human immunodeficiency virus (HIV), transmissions between humans and primates resulted in multiple HIV lineages in humans. This evolution has been rapid, giving rise to a complex...
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Phylogeny and Taxonomy of the Dermatophytes Using Sequence Analysis of the Ribosomal Internal Transcribed Spacer 1 Region

Suh MK, Kim BC, Kim JC

  • KMID: 2230354
  • Korean J Dermatol.
  • 2000 Sep;38(9):1186-1193.
BACKGROUND: The species of dermatophytes have been identified and classified by morphological and biochemical characterization as well as by mating experiments. But these techniques are either time consuming or lacking...
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Macrofungal Survey of the Tian Shan Mountains, Kyrgyzstan

Cho SE, Jo JW, Kim NK, Kwag YN, Han SK, Chang KS, Oh SH, Kim CS

The Tian Shan mountain system is one of the large mountain ranges located in Central Asia. This region is globally recognized as mountain ranges, offering inestimable wealth in fauna and...
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Phylogenetic Relationships of the Polyporaceae Based on Gene Sequences of Nuclear Small Subunit Ribosomal RNAs

Kim SY, Jung HS

  • KMID: 1993705
  • Mycobiology.
  • 2001 Jun;29(2):73-79.
The Polyporaceae is a chaotic mass of genera having poroid hymenophores in the Aphyllophorales. To classify the Polyporaceae into more natural groups, phylogenetic analyses were performed using nuclear small subunit...
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Molecular Phylogeny and Morphology of Mycosphaerella nawae, the Causal Agent of Circular Leaf Spot on Persimmon

Lee SY, Lim YS, Jung HY

In this study, the phylogeny and morphology of Mycosphaerella nawae (Dothideomycetes, Ascomycota) were examined using Korean and Japanese isolates, to establish the phylogenetic relationship between M. nawae and its allied...
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The First Report of Antrodia sitchensis (Polyporaceae, Basidiomycota) in Korea

Jang Y, Choi HE, Lim YW, Lee JS, Kim JJ

  • KMID: 2312645
  • Mycobiology.
  • 2011 Sep;39(3):226-229.
An unrecorded Antrodia species was collected in South Korea and based on morphological characteristics, the species was identified as Antrodia sitchensis. To confirm its affinity within the polypores, the phylogenetic...
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Molecular Phylogeny of Acanthamoeba

Kong HH

After morphological grouping of Acanthamoeba by Pussard and Pons, phylogeny of the genus has been always a big topic to the researchers. Because of the variability of morphological characteristics, unchangeable...
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Two New Species of the Genus Candelariella from China and Korea

Liu D, Wang L, Wang XY, Hur JS

Candelariella is a widespread lineage of lichenized ascomycetes with ambiguous relationships among species that have not solved completely. In this study, several specimens belonging to Candelariella were collected from China...
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High-quality draft genome and characterization of commercially potent probiotic Lactobacillus strains

Sulthana A, Lakshmi SG, Madempudi

Lactobacillus acidophilus UBLA-34, L. paracasei UBLPC-35, L. plantarum UBLP-40, and L. reuteri UBLRU-87 were isolated from different varieties of fermented foods. To determine the probiotic safety at the strain level,...
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Molecular and Morphological Confirmation of Three Undescribed Species of Mortierella from Korea

Nguyen TT, Park SW, Pangging M, Lee HB

Three fungal isolates designated as CNUFC-YR329-1, CNUFC-PTS103-1, and CNUFC-PTS2-1 were discovered during a survey of fungal diversity of the order Mortierellales from freshwater and pine tree rhizosphere soil samples in...
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Phylogeny and Taxonomy of the Dermatophytes Using Sequence Analysis of the Chitin Synthase 1 Gene

Suh MK, Kim BC, Kim JC

  • KMID: 1575525
  • Korean J Med Mycol.
  • 2000 Jun;5(2):51-59.
BACKGROUND: The species of dermatophytes have been identified and classified by morphological and biochemical characterization as well as by mating experiments. But these techniques are either time consuming or lacking...
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Three Unrecorded Species Belonging to Penicillium Section Sclerotiora from Marine Environments in Korea

Park MS, Chung D, Baek K, Lim YW

Species that belong to Penicillium section Sclerotiora are commonly found in various terrestrial environments, but only a few have been reported in marine environments. Because the number of Penicillium species...
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Taxonomic Study on the Lichen Genus Xanthoparmelia (Ascomycotina, Parmeliaceae) in Korea

Wang XY, Koh YJ, Hur JS

In previous studies investigating the genus Xanthoparmelia, thirteen different species have been reported from South Korea alone. However, there currently has been no revisional study performed until now. To explore...
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Phylogeny of Flavobacteria Group Isolated from Freshwater Using Multilocus Sequencing Analysis

Mun S, Lee J, Lee S, Han K, Ahn TY

Sequence analysis of the 16S rRNA gene has been widely used for the classification of microorganisms. However, we have been unable to clearly identify five Flavobacterium species isolated from a...
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Isolation and Characterization of Two Rare Mucoralean Species with Specific Habitats

Lee SH, Nguyen TT, Lee HB

The order Mucorales, the largest in number of species within the Mucoromycotina, comprises typically fast-growing saprotrophic fungi. During a study of the fungal diversity of undiscovered taxa in Korea, two...
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