Gut Liver.
2007 Jun;1(1):40-48.
Analysis of Gene Expression Profile of AGS Cells Stimulated by Helicobacter pylori Adhesion
- Affiliations
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- 1Department of Internal Medicine and Liver Research Institute, Seoul National University College of Medicine, Seoul, Korea. nayoungkim49@yahoo.co.kr
- 2Department of Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul, Korea.
- 3Department of Microbiology and Institute of Biomedical Science, Hanyang University College of Medicine, Seoul, Korea.
- 4Department of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, Korea.
Abstract
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BACKGROUND/AIMS: Interactions between H. pylori and gastric epithelial cells contribute to gastric inflammation and epithelial damage. This study was performed to evaluate the gene expression profile of AGS cells by adhesion of H. pylori.
METHODS
Changes in AGS cell gene expression induced by co-culturing with H. pylori (G69a strain) (4, 12, 24, 48 hours) were monitored using oligonucleotide microarray. Real-time reverse transcription-polymerase chain reaction (RT-PCR) was performed for data validation by the Assay-on-Demand Gene Expression product method.
RESULTS
A total of 270 (2.66%) and 19 genes (0.19%) were up-regulated in AGS cells by H. pylori adhesion. Gene ontology analysis showed that up-regulated genes were categorized into endolipidase activity (17 genes), receptor binding (17 genes), integrin binding (4 genes), and two down-regulated genes into GTP binding category. The expression levels of 20 up- and 5 down-regulated genes were quantified by real-time RT-PCR. Sixteen genes involving cytokine activity (IL8, IL1B, TNF), hydrolase activity (PTP4A1, ERCC1, CASP8, CASP7, ACIN1), VIP receptor activity (VIPR2), and neuropeptide Y receptor activity (GPR83) were confirmed to be up-regulated. Five genes, namely, ARF3, M17S2, DDB2, AWP1, and WTAP were confirmed to be down-regulated.
CONCLUSIONS
Host genes are significantly changed by H. pylori adhesion, which might explain the gastroduodenal pathogenesis induced by H. pylori infection.
Keyword
MeSH Terms
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Epithelial Cells
Gene Expression*
Gene Ontology
Guanosine Triphosphate
Helicobacter pylori*
Helicobacter*
Inflammation
Oligonucleotide Array Sequence Analysis
Receptors, Neuropeptide Y
Receptors, Vasoactive Intestinal Peptide
Transcriptome*
Guanosine Triphosphate
Receptors, Neuropeptide Y
Receptors, Vasoactive Intestinal Peptide
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