- A Short History of the Genome-Wide Association Study: Where We Were and Where We Are Going
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Ikegawa S
- KMID: 2053300
- Genomics Inform.
- 2012 Dec;10(4):220-225.
- doi: 10.5808/GI.2012.10.4.220
Recent rapid advances in genetic research are ushering us into the genome sequence era, where an individual's genome information is utilized for clinical practice. The most spectacular results of the... -
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- Development of KHapmap Browser using DAS for Korean HapMap Research
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Jin H, Kim SH, Kim YU, Park YK, Ji M, Kim YJ
- KMID: 2166339
- Genomics Inform.
- 2008 Jun;6(2):57-63.
The Korean HapMap Project has been carried out for the last 5 years since it started in June, 2003. The project generated data for a sum of 1,764,000 Korean SNPs... -
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- The Korean HapMap Project Website
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Kim YU, Kim SH, Jin H, Park YK, Ji M, Kim YJ
- KMID: 2166346
- Genomics Inform.
- 2008 Jun;6(2):91-94.
Single nucleotide polymorphisms (SNPs) are the most abundant form of human genetic variation and are a resource for mapping complex genetic traits. A genome is covered by millions of these... -
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- Haplotype Phylogeny of a 200kb Region in the Human Chromosome X Terminal Band (q28)
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Kim S
- KMID: 2166409
- Genomics Inform.
- 2008 Sep;6(3):130-135.
The haplotypes of a 200 kb region in the human chromosome X terminal band (q28) were analyzed using the International HapMap Project PhaseII data, which had been collected for three... -
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- FESD II: A Revised Functional Element SNP Database of Human Ethnicities
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Kim HJ, Kim IH, Shin KH, Park YK, Kang H, Kim YJ
- KMID: 2166283
- Genomics Inform.
- 2007 Dec;5(4):188-193.
The Functional Element SNPs Database (FESD) categorizes functional elements in human genic regions and provides a set of single nucleotide polymorphisms (SNPs) located within each area. Users may select a... -
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- A Scheme for Filtering SNPs Imputed in 8,842 Korean Individuals Based on the International HapMap Project Data
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Lee K, Kim S
- KMID: 2053233
- Genomics Inform.
- 2009 Jun;7(2):136-140.
Genome-wide association (GWA) studies may benefit from the inclusion of imputed SNPs into their dataset. Due to its predictive nature, the imputation process is typically not perfect. Thus, it would... -
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- Genome-Wide Association Study in Psychiatric Disorders
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Kim SJ, Hong KS
- KMID: 2341852
- J Korean Neuropsychiatr Assoc.
- 2011 Jan;50(1):20-38.
Most psychiatric disorders are some kinds of complex genetic traits. Identifying the causal genes of psychiatric disorders has been challenging. Through recent revolutionary advances, such as the HapMap Project and... -
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- Effective Population Size of Korean Populations
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Park L
- KMID: 2391498
- Genomics Inform.
- 2014 Dec;12(4):208-215.
- doi: 10.5808/GI.2014.12.4.208
Recently, new methods have been developed for estimating the current and recent changes in effective population sizes. Based on the methods, the effective population sizes of Korean populations were estimated... -
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- Semantic Modeling for SNPs Associated with Ethnic Disparities in HapMap Samples
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Kim H, Yoo WG, Park J, Kim H, Kang BC
- KMID: 1708246
- Genomics Inform.
- 2014 Mar;12(1):35-41.
- doi: 10.5808/GI.2014.12.1.35
Single-nucleotide polymorphisms (SNPs) have been emerging out of the efforts to research human diseases and ethnic disparities. A semantic network is needed for in-depth understanding of the impacts of SNPs,... -
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- Effects of Single Nucleotide Polymorphism Marker Density on Haplotype Block Partition
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Kim SA, Yoo YJ
- KMID: 2366436
- Genomics Inform.
- 2016 Dec;14(4):196-204.
- doi: 10.5808/GI.2016.14.4.196
Many researchers have found that one of the most important characteristics of the structure of linkage disequilibrium is that the human genome can be divided into non-overlapping block partitions in... -
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- Identification of 1,531 cSNPs from Full-length Enriched cDNA Libraries of the Korean Native Pig Using in Silico Analysis
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Oh Y, Nguyen DT, Park K, Dirisala V, Choi H, Park C
- KMID: 2053226
- Genomics Inform.
- 2009 Jun;7(2):65-84.
Sequences from the clones of full-length enriched cDNA libraries serve as valuable resources for functional genomics related studies, genome annotation and SNP discovery. We analyzed 7,392 high-quality chromatograms (Phred value... -
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- An Association Study of the Signal Transducer and Activator of Transcription 6 Gene With Periodic Psychosis
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Kawashige , Kanazawa T, Tsutsumi A, Kikuyama H, Uenishi H, Koh J, Yoneda H
- KMID: 2315784
- Psychiatry Investig.
- 2008 Mar;5(1):41-44.
OBJECTIVE: Recent molecular and genetic investigations have suggested that the current nosology for major psychiatric disorders, based on the "two-entities-principal" is not accurate with respect to clinical observations; patient groups... -
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- Characterization of Single Nucleotide Polymorphisms in 55 Disease-Associated Genes in a Korean Population
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Lee SK, Kim HG, Kang JJ, Oh W, Oh B, Kwack KB
- KMID: 2166273
- Genomics Inform.
- 2007 Dec;5(4):152-160.
Most common diseases are caused by multiple genetic and environmental factors. Among the genetic factors, single nucleotide polymorphisms (SNPs) are common DNA sequence variations in individuals and can serve as... -
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- No Association Study of SLC6A4 Polymorphisms with Korean Autism Spectrum Disorder
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Yoo HJ, Cho IH, Park M, Yang SY, Kim SA
- KMID: 2299975
- Korean J Biol Psychiatry.
- 2009 May;16(2):121-126.
OBJECTIVES : The serotonin transporter gene(SLC6A4) is one of the most widely studied candidate genes in autism spectrum disorder(ASD), but there have been conflicting results from studies into the association... -
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- Comparison of Normalization Methods for Defining Copy Number Variation Using Whole-genome SNP Genotyping Data
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Kim JH, Yim SH, Jeong YB, Jung SH, Xu HD, Shin SH, Chung YJ
- KMID: 2166424
- Genomics Inform.
- 2008 Dec;6(4):231-234.
Precise and reliable identification of CNV is still important to fully understand the effect of CNV on genetic diversity and background of complex diseases. SNP marker has been used frequently... -
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- Chromosome 22 LD Map Comparison between Korean and Other Populations
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Lee JE, Jang HY, Kim S, Yoo YK, Hwang JJ, Jun H, Lee K, Son O, Yang JM, Ahn KS, kim E, Lee HW, Song K, Kim HL, Lee SG, Yoon Y, Kimm K, Han BG, Oh B, Kim CB, Jin H, Choi KO, Kang H, Kim YJ
- KMID: 2166317
- Genomics Inform.
- 2008 Mar;6(1):18-28.
Single nucleotide polymorphisms (SNPs) are the most abundant forms of human genetic variations and resources for mapping complex genetic traits and disease association studies. We have constructed a linkage disequilibrium(LD)... -
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